Baron, M. H., 25
Bittner, M., 387
Bonner, J. J., 283
Bonny, C., 61
Bradfield, C. A., 205
Bral, C. M., 191
Breen, G. A. M., 163
Bresnick, E. H., 87

Carlson, T., 283
Castillo, S. O., 1
Chang, C.-Y., 39
Childs, G., 133
Choukroun, G., 337
Christian, N., 283
Crews, S., 171
Curatola, A. M., 357

del Monte, F., 337
Dillmann, W. H., 349
Djemaï, A., 61
Dozin, B., 1

Edelmann, L., 133
Estrada-Rodgers, L., 13

Force, T., 337
Fornace, Jr., A. J., 387

Gaynor, R. B., 233
Ghosh, R., 149
Ghoshal, K., 301
Goldschmidt-Clermont, P. J., 255
Gorospe, M., 377
Gould, K. A., 87
Gourdon, L., 103
Gu, Y.-Z., 205

Jacob, S. T., 301
Jolly, C., 261
Jordan, E. A., 163

Kahn, A., 103
Kang, C.-J., 191
Kasai, Y., 171
Kaufman, R. J., 293
Klein, N., 357
Kopytek, S. J., 75
Kostrouch, Z., 1
Kovacs, A. M., 115
Kyriakis, J. M., 217

Latchman, D. S., 311
Lefrançois-Martinez, A.-M., 103
Leibold, E. A., 367
Levy, G. N., 13
Li, X. H., 233
Lister, J. A., 25

Marsee, D. K., 321
Martin, J. L., 349
Meltzer, P., 387
Mestril, R., 349
Moldovan, L., 255
Moran, S. M., 205
Morano, K. A., 271
Moriizumi, S., 103
Morimoto, R. I., 261
Mukhopadhyay, D., 53
Myers, T. G., 387

Nikodem, V. M., 1
 

Raymondjean, M., 103
Reiser, V., 247
Rosenbusch, J. P., 149
Rosenzweig, A., 337
Ruis, H., 247

Schneider, R. J., 357
Schorderet, D. F., 61
Sheridan, J. F., 301
Sivaprasad, U., 321
Smith, D. L., 39
Stahl, S., 171
Steiert, M., 149
Steinke, J. W., 191
Stephanou, A., 311
Sukhatme, V. P., 53

Thiele, D. J., 271
Tirasophon, W., 293
Trent, J., 387
Tsiokas, L., 53

Wang, X., 377
Wang, Y.-F., 149
Wartman, L., 205
Weber, L. A., 349
Weber, W. W., 13
Weinsten, J. N., 387
Welihinda, A. A., 293
Wolfgang, C. D., 321

Xiao, Q., 1

Young, R., 39

Zimmer, W. E., 115
 

Bacteriophage lysis, 39
Basic helix?loophelix?leucine zipper, 103

Calcium-induced stabilization, 357
Cancer, 53
Cardiac hypertrophy, 337
Cardiomyocytes, 349
Cardioprotection, 349
Cell culture, 115
Cell cycle, 271
Cell density, 53
Cip1, 377
9-cis-RA, 1
c-Jun, 217
c-Jun N-terminal kinases, 337
Conformational change, 283
Cyclin-dependent kinase inhibitor, 377

Developmental gene regulation, 115
DNA binding protein, 283
Dorsal, 171
Dorsal/ventral, 171

E-box, 87
ER stress, 293
Erythroid, 87
Erythroid differentiation, 25

Gcn5/Ada complex, 293
Gene expression, 149
Gene induction, 377
Gene regulation, 25, 53
Genotoxic stress, 377, 387
Globin switching, 25
Glucocorticoids, 13
Glucose, 103
Growth arrest, 377
Growth signals, 271

In vitro transcription, 191
Initiator element, 163
Ionizing radiation, 387
Ire1, 293
Iron regulatory proteins, 367
Ischemia, 349

JNK, 217

Leukemogenesis, 87
L-Type pyruvate kinase, 103

MAPK, 247
MEK, 247
Metallothionein, 301
Methylation, 61
Methyl-DNA binding proteins, 61
Microarray, 387
Molecular characterization, 205
Molecular mechanisms, 301
Mouse mammary tumor virus, 75

NF-k B, 233
Nuclear function, 261
Nuclear import and export, 247
Nuclear structure, 261
Nur77, 1
Nurr1, 1
Nurr1a, 1

Open transcription complexes, 75
Outer membranes, 149
Overexpression, 39, 149

p38, 217
p38 MAP kinase, 349
p53, 377, 387
Porins, 149
Promoter, 13
Protein tyrosine phosphorylation, 53
Ptc2, 293
 

Saccharomyces cerevisiae, 283
SAPK, 217
SCL, 87
Sdi1, 377
Sea urchin, 133
Short-lived mRNAs, 357
Signal transduction, 255
Single-minded, 171
Small GTP binding proteins, 255
Smooth muscle differentiation, 115
Snail, 171
Social reorganization stress, 301
SSAP binding sites, 133
STAT family, 311
Stress, 247, 255, 271
Stress-activated protein kinases, 337
Stress response(s), 311, 321, 377
Superoxide, 255

T-ALL, 87
TAL1, 87
TATA binding protein, 191
Tax protein, 233
Tissue-specific expressions, 115
TNF, 217
TRAF, 217
Transcription, 171
Transcriptional activity, 61
Transcriptional regulation, 1, 115
Transcription complex, 191
Transcription factor(s), 25, 87, 283, 311, 321
Transcription initiation, 75
Twist, 171

Unfolded protein response, 293
Upstream stimulatory factor, 103
Upstream stimulatory factor 2, 163

VEGF, 53
Visceral smooth muscle, 115
von Hippel-Lindau (VHL), 53

Waf1, 377

X inactivation, 61
Xist gene, 61

Yeast, 247

Banerjee, A. K., 275
Baron, M. H., 129
Bègue, A., 333
Besse, S., 315
Blumenberg, M., 361
Bogenhagen, D. F., 219
Bradfield, C. A., 287
Breindl, M., 35
Brinckerhoff, C. E., 197
Bronson, R. T., 301
Brun, G., 259
Butt, T. R., 169

Calandra, C., 185
Carr, K. M., 287
Carrodeguas, J. A., 219
Cavener, D. R., 349
Chan, W. K., 287
Chang, C., 87
Chang, L. A., 169
Chang, W.-C., 87
Chattopadhyay, D., 275
Chen, D., 45
Chen, J.-L., 275
Cheung, T. C., 59
Clayton, D. A., 219
Costa, R. H., 23
Crawford, D., 349
Crepieux, P., 333

Daegelen, D., 1
Das, T., 275
Diaz, J.-J., 315
Duhig, T., 209

Englander, E. W., 151

Freedberg, I. M., 361
Fried, M., 209

Garson, K., 209
Geltinger, C., 113
Goraya, T. Y., 73
Górski, G. K., 139
Gottesfeld, J. M., 389
Gu, Y.-Z., 287
 

Jain, S., 287
Johnson, P. F., 373

Kahn, A., 1
Kedinger, C., 315
Kessler, S. P., 73
Kindbeiter, K., 315
Kunkel, G. R., 59

Laudet, V., 333
Lee, K. E., 35
Loiseau, L., 259
Luo, G., 287

Ma, S., 361
Madjar, J.-J., 315
Mathur, M., 275
McBryant, S. J., 389
McNamara-Schroeder, K. J., 59
Miyake, J. H., 59
Moch, C., 1
Murgola, E. J., 101

Norton, P. A., 139

Omori, M., 15
Organ, E. L., 349

Pagel, F. T., 101
Pasteau, S., 259
Pereira, S., 241
Perlaky, S. E., 349
Platt, T., 241
Polack, A., 113
Puvion, E., 315
Puvion-Dutilleul, F., 315

Rao, L., 361
Rao, M. S., 15, 185
Razzaghi, H., 35
Reddy, J. K., 15, 185
Reinertsen, K. K., 301
Rhodes, K., 35
Russnak, R., 241

Samadani, U., 23
Schroen, D. J., 197
Sen, G. C. , 73
Shadel, G. S., 219
Spruyt, N., 333
Stehelin, D., 333
Stiles, C. D., 301
Stumph, W. E., 59

Thorgeirsson, S. S., 15
Tsukamoto, N., 87
Tyshenko, M. G., 231

Urso, O., 59

Vigneron, M., 315
Vu-Dac, N., 333

Walfish, P. G., 169
Walker, V. K., 231
Wang, C., 301
Warren, S. L., 315
Weir, L., 45
Williams, S. C., 373

Yang, Y.-F., 169
Yoganathan, T., 169
Yoshida, A., 87
Yukawa, M., 15
Yun, S., 219

Zhu, Y., 185

Basic region, 373
bHLH-PAS superfamily, 287
Burkitt's lymphoma, 113
bZIP, 373

7C2 monoclonal antibody, 315
Casein kinase II, 275
C/EBP, 15
C/EBPb, 373
C/EBP proteins, 373
c-est-2, 333
Chromatin, 151
Clusters of interchromatin granules, 315
c-myc, 113
Col1al, 35
CRP1 (C/EBPe), 373

Development, 349
Dihydrofolate reductase, 231
DNA binding proteins, 151
DP proteins, 259
Drosophila cells, 231

E2F transcription factor(s), 45, 259
eIF-2a, 349
Electron microscopy, 315
3´ end cleavage factors, 241
Enhancer motifs, 59
Erythroid transcription factors, 129
Eukaryotic transcription, 59

Fast-muscle-specific enhancer, 1
Fetal liver, 139
Fibronectin, 139
Fork head, 23
Frameshifting, 101

G3·U70, 101
Gene expression, 197, 301, 333
Gene mutation, 231
Gene regulation, 87, 129
Gene structure, 87

Immunoglobulin k enhancers, 113
In situ hybridization, 315
In vitro differentiation, 35
Isoform-specific DNA binding site, 23

Keratins, 361

lacZ staining, 301
Ligand-dependent synergy, 169
Liver-enriched transcription factor, 23
Locus control region, 129

Matrix metalloproteinase (MMP), 197
Methotrexate resistance, 231
Mitochondria, 219
Molecular characterization, 287
Molecular cloning, 259
Mouse steroid receptor coactivator-1, 185
Mouse surfeit locus, 209
mtTFB, 219
Multiple mechanisms, 197
Multiple-promoter system, 1
Murine a1 type I collagen, 35
Murine Hif-1a, 287

NF-kB, 361
Nonmuscle myosin, 45
Nuclear hormone receptors, 197
Nuclear localization signals, 373

Oncogene, 333
Oval cells, 15

P19 EC cells, 35
Pancreatic hepatocytes, 15
PDGF a receptor, 301
Peroxisome proliferator-activated receptor g, 185
Phosphorylation, 275
Pol III, 151
Pol III transcription, 389
P protein, 275
Promoter(s), 45, 333
Promoter P1 transcription, 113
Protein-protein interactions, 241

Shared regulatory sequences, 1
Sigma factors, 219
Silencer, 73
SL2 cells, 113
snRNA genes, 59
Sp1, 113
Sp3, 113
SPH binding factor, 59
Stem cell factor, 15
Subtype specificity allosterism, 169
Suppression, 101
Surf-4 mRNA, 209
Surf-5 mRNA, 209

TATA box, 113
TFIIIA, 389
TFIIIC, 389
Thyroid hormone (T3) receptors, 169
Tissue-specific processing, 209
Transactivation, 45
Transcriptional activity, 185
Transcriptional control, 361
Transcriptional regulation, 169
Transcription factor, 73
Transcription factories, 315
Transfection, 315
Transgenic mice, 301
Translation, 349
Translocation genetics, 113
Tritiated uridine, 315
tRNA identity, 101

U6 snRNA, 59
Ubiquitous enhancer, 1
Us11 gene, 315

Vesicular stomatitis virus, 275

Winged helix, 23

Yeast mRNA processing, 241
Yeast transcription, 219

Basu, A., 93
Bergman, Y., 285
Besse, S., 79
Braithwaite, A., 19
Breen, G. A. M., 181
Browning, D. D., 205
Buskin, J., 19
Butt, T. R., 255

Carter, R. S., 93
Chang, Y.-N., 217
Chatterjee, N., 113
Chu, R., 123
Clayton, D. A., 155
Cluzeaud, F., 315
Conneely, O.M., 169

Daviet, L., 217
Davis, A. F., 155
Dobson, A. D. W., 169
Duarte, M., 217

Emiliani, S., 245
Eriksson, E., 269

Gatignol, A., 217
Gilmour, K. C., 1
Gowda, S., 143
Greenleaf, A. L., 49
Gupta, N. K., 113
Gupta, S., 113

Ilan, Joseph, 113
Ilan, Judith, 113

Jackson, P., 19
Jacob, G. A., 193
Jeang, K.-T., 217
Jeong-Yu, S., 155
Jordan, E. M., 181

Kahn, A., 315
Keller, C., 169
Kravchenko, V. V., 205

Laskov, R., 285
Lin, R.-J., 301
Lin, Y., 123
Linzer, D. I. H., 133
Luse, D. S., 193

Miquerol, L., 315
Mordacq, J. C., 133
Murphy, E. P., 169

Oliver, N., 269
Osterman, J. C., 113

Pan, J., 123
Pan, Z., 205
Perrem, K., 19
Planta, R. J., 71
Porteu, A., 315
Prossnitz, E. R., 205
Puvion-Dutilleul, F., 79
 

Scholthof, H., 143
Schwer, B., 331
Sethy, I., 35
Shepherd, R. J., 143
Shield, M., 19
Shuman, S., 331
Shurman, L., 285
Sible, J. C., 269
Skantar, A. M., 49
Sucharov, C., 93

Thiesen, H.-J., 229

Usuda, N., 123

Van Lint, C., 245
Vander Zee, C. A., 181
Vandewalle, A., 315
Verdin, E., 245

Walfish, P. G., 255
Willis, I. M., 35
Wu, F. C., 143
Wu, S., 113

Ye, R. D., 205
Yean, S.-L., 301
Yeldandi, A. V., 123
 

Cell extraction, 79 
Cellular faclors, 217 
Chemoatlractanl, 205 
Chromatin, 245 
Complex assembly, 193 
Consensus sequence, 169 
Cyclic AMP response element, 269 
Cytochrome oxidase Vb gene, 93 
Cvtokines, 1 

DEAH proteins, 301 
Designer zinc finger proteins, 229 
Differential display, 245 
Domain interference, 49 
Drosophila, 49 

est motif, 93 
Eukaryotic initiation factor, 113 
Export, 155 
Extracellular matrix, 269 

F₀F₁ ATP synthase, 181 
Figwort mosaic virus (FMV), 143 
Functional expression, 123 
Fusion proteins, 49 

GABP factor, 93 
Gene transcription, 113 
Gene transcription activation, 1 
Glucocorticoid receptor, 133 
G-protein. 205 

Histone, 245 
HIV, 217 
HIV-1, 229, 245 
Human nuclear receptors, 255 
Hybrid cells, 285 
 

Krüppel-type zinc finger genes, 229 

L-type pyruvate kinase gene, 315 

Mitochondria, 181 
Monkey kidney cells, 123 
mRNA capping enzymes, 331 
MRP RNA, 155 
Multicopy suppressor, 331 
Muscle creatine kinase, 19 
myc, 245 

Negative regulation, 285 
NFB, 205 
Nonsense suppression, 35 
Nuclear receptor function in yeast, 255 
Nutrient gene regulation, 315 

Orphan receptor, 169 

p53, 19 
Peroxisomal targeting, 123 
Polycistronic mRNA, 143 
Pre-mRNA splicing, 301 
Precursor rRNA, 71 
Processing, 71 
Proliferin gene expression, 133 
Promoter clearance, 193 
PRP2 ATPase, 301

Receptors, 205 
Repressor domains, 229 
Reticulocyte lysates, 143 
Ribosome, 71 
RNA binding proteins, 217 
RNA polymerase II, 49 
RNA polymerase II promoters, 193 
RNA polymerase III, 35 

Target genes, 169 
Targeted carcinogenesis, 315 
Targeting transcriptional regulation, 255 
Tat, 217 
TCRa, 285 
TCRb, 285 
Temperature-sensitive mutations, 331 
TFIIF, 49 
Th autoantigen, 155 
Tissue-specific expression, 315 
Trans-activation, 217 
Transcription activation, 205 
Transcription factor(s), 19, 49, 181 
Transcription initiator, 93 
Transcription regulation, 133 
Transcriptional activation, 35 
Transcriptional activators, 193 
Transcriptional regulation, 169 
Transgenic mice, 315 
Trapoxin, 245 
Trichostatin, 245 
Tumor suppressor, 19 
Tyrosine kinases, 1 

Urate oxidase, 123 

Wound healing, 269 

Yeast, 71, 331 
YY1, 181 

Xenopsus laevis, 155